Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939191.1_cds_XP_016483862.1_74937
CDS Infomation

[gene=LOC107804475] [db_xref=GeneID:107804475] [protein=U-box domain-containing protein 9-like] [protein_id=XP_016483862.1] [location=complement(join(18843..19922,20560..20856))] [gbkey=CDS]
Sequence

ATGGCGAAGACAGGTGTAGTTGAAGGCGATCCAATTACTGTGGCGACTGCAAAGGCAGCA
ACAGAGTTGAAAAGAGAGTTACAGAGACTAGTTAAGGCTATTTTGTCTGAAGATGACATC
AATGTGGACGCCATTGATAAAACTCATCAAACCCTTTTCGCCTTAAAAGACCTAAAGCTT
AAACGACAGTCCTCGTTCAGGACTAGTCCTGATTCTGCCCGTGTTTTGCCTGATGAATTT
CGCTGCTCACTTTCTAAAGAACTCATGAGGGATCCTGTTATCGTTTCCACCGGTCAGACT
TATGATAGACCTTTCATTCAGAAATGGTTAAAGGCTGGGAATAGGACGTGCCCTCGAACA
CAACAAGTACTTTCACATACAATTCTTACACCTAATCACTTGATTCGTGAGATGATCTCA
CAATGGTGTAAAAATAATGGGATTCAAATGCCAGACCCTGTTCAGTATCTGAATGATGAA
GGGTCGACTGAAGCTGATCGAGATTTATTCTTCTCTTTGCTTGAGAAGATGTCTTCAATA
TTATCTGATCAAAAAGTTGCTGCAAGGGAATTACGTTTGTTAACGAAGAAAATGCCTTCT
TTTCGGGCACTATTTGGAGAATCTGCAGATGCAATTCCTCAACTTCTGCGTCCCCTTTCT
CGAAGCAATAGTGGTGTTCATCCGAATCTCCAAGAAGACATAATCACTACACTTTTGAAT
CTTTCCATCCATGACAATAACAAGAAGCTCGTCGCAGAGACTCCAATGGTTGTTCCACTT
CTTATGGACGCATTAAGATCAGGAACGATTGAAACAAGGAGCAATGCAGCAGCTGCCCTT
TTCACACTGTCTGCACTCGACTCTAATAAAGAGCTTATCGGAAAATCTGGTGCTCTGAAA
CCGCTGGTTGAACTCGTAGATGAAGGGAACCCGGTAGCGATGAAGGATGTCGCTTCAGCT
ATTTTTAGTCTGTGCATTATCCATGATAATAAGGCAAGAGCTGTTAGAGATGGTGCCGTG
AGGGTTATCCTGAAAAATATAATGAATAACGTGCATGTCGACGAATTGCTAGCCATACTA
GCAATGCTATCAACTAATCAAAAGGCAATTGAGGAAATGGGAGACCTTGGAGCAGTTCCA
TGTTTGCTTAATATAATAAGGGAGACCTCGTGTGCTCGTAGCAAGGAGAATTGTATTGCA
ATCCTTTACACAATCTGTTATACCGACAGAACCAAGTGGAAGATAATAAGGGATGAGGAG
AAAACCTACGGGACAGTCTCTCAACTTGCTGAAAATGGTACAGCAAGAGCCAAGAGAAAG
GCCAACGGTATTCTCGACAGACTGAACAGGGCTGTGAATCTTACTCATACTGCATAA

Peptide Sequence

PEP ID

XP_016483862.1
PEP Infomation

PREDICTED: U-box domain-containing protein 9-like [Nicotiana tabacum]
Sequence

MAKTGVVEGDPITVATAKAATELKRELQRLVKAILSEDDINVDAIDKTHQTLFALKDLKL
KRQSSFRTSPDSARVLPDEFRCSLSKELMRDPVIVSTGQTYDRPFIQKWLKAGNRTCPRT
QQVLSHTILTPNHLIREMISQWCKNNGIQMPDPVQYLNDEGSTEADRDLFFSLLEKMSSI
LSDQKVAARELRLLTKKMPSFRALFGESADAIPQLLRPLSRSNSGVHPNLQEDIITTLLN
LSIHDNNKKLVAETPMVVPLLMDALRSGTIETRSNAAAALFTLSALDSNKELIGKSGALK
PLVELVDEGNPVAMKDVASAIFSLCIIHDNKARAVRDGAVRVILKNIMNNVHVDELLAIL
AMLSTNQKAIEEMGDLGAVPCLLNIIRETSCARSKENCIAILYTICYTDRTKWKIIRDEE
KTYGTVSQLAENGTARAKRKANGILDRLNRAVNLTHTA

Transcript Sequence

Gene sequence data has not been registered.